CDS

Accession Number TCMCG042C46427
gbkey CDS
Protein Id XP_016478563.1
Location join(17208..17353,18291..18331,18426..18589,18744..18846,18943..19112,19793..20296)
Gene LOC107799939
GeneID 107799939
Organism Nicotiana tabacum

Protein

Length 375aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016623077.1
Definition PREDICTED: RNA-binding protein squid-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12741        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071216        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072396        [VIEW IN EMBL-EBI]
GO:0072402        [VIEW IN EMBL-EBI]
GO:0072423        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098787        [VIEW IN EMBL-EBI]
GO:0098789        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACGAACAGAATGGGACTACTGTAAATGGTGTTAATATTAAGTTGGAGGAAGAAGAAACAAATGACCTAAGAACAACTCCTGACCATCAAAACGACGACGTCGGCGCCTCTCAACCTCATACTGGAGATGGTGCTAGTCCTGGAAAGATATTTATTGGGGGCTTGGCTAGAGAGACTACTTCAGCTCAATTTGTCAAGCACTTTGGTAAATATGGTGAGATTATTGATTCTGTGATTATGAAGGACAGGCGAACAGGGCAGCCGCGCGGGTTTGGTTTTGTGACTTATGCTGACCCTTCAGTGGTGGATAGAGTCATTGAGGAAGACCACGTTATAAATGGAAAGCAAGTGGAAATCAAGCGAACTATACCTAGAGGAGGAGGTTCCAGCTCAAAAGATTTCAAGACGAAGAAGATTTTTGTGGGCGGCATCCCAACAACAGTTAGTGAAGATGAGTTCAAAGACTTCTTTTTAAAGTTTGGAGAGGTGAACGAGCACCAGATTATGCGTGACCATTCTACTGGTCGTTCTCGTGGCTTTGGATTCATTACTTTTGACGCAGAAAAATCTGTTGAGGATATCTTGGCTAATGGAAACAGACTTGATTTTGCTGGAACCCAGGTGGAAATCAAGAAGGCTGAGCCGAAGAGACCTAATGCACCACTGCCAGCCCCATCCAAGCGCCAAGGTCATCCGAGAGCTTCATTTGGTGGTGGATTTTCAGATGCTTATGGTGGATATGGAGACTCTGGCTTTGGTGCTGGTGGTCCTTATAGGTCCGGTGGCCCCTATGGTGGTAGATCCAGTGCATTTGGTGGATATAGTGGAGCGGCAATGGGTGGATATGGAGCATATGGTGGCAGTGGTGCCTATGGAGGCTTTAGGGAGGAGGCTTCTTTTGGGTATTCTAGCCGTTATGATGGAGCTTTTGGTAGAGGTTATGATGTTGGTGGTGGCTATGGGGGACCTAGTGAAGGTTATGGAGGATATGCTGCCGGTAGCGGTGGATATGGTGCTGGTCTTGGCGGTGGTTATGGAGGAGACGGTACTGGAGGTTCAGTGTATGGAAGTAGGGGAAGCTATGGTGGTGCTGGTTCCGGCAGATATCACCCGTATGGGAGATAG
Protein:  
MDEQNGTTVNGVNIKLEEEETNDLRTTPDHQNDDVGASQPHTGDGASPGKIFIGGLARETTSAQFVKHFGKYGEIIDSVIMKDRRTGQPRGFGFVTYADPSVVDRVIEEDHVINGKQVEIKRTIPRGGGSSSKDFKTKKIFVGGIPTTVSEDEFKDFFLKFGEVNEHQIMRDHSTGRSRGFGFITFDAEKSVEDILANGNRLDFAGTQVEIKKAEPKRPNAPLPAPSKRQGHPRASFGGGFSDAYGGYGDSGFGAGGPYRSGGPYGGRSSAFGGYSGAAMGGYGAYGGSGAYGGFREEASFGYSSRYDGAFGRGYDVGGGYGGPSEGYGGYAAGSGGYGAGLGGGYGGDGTGGSVYGSRGSYGGAGSGRYHPYGR